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Indian ancestry revealed
Nature News ^ | 23 Sep 2009 | Elie Dolgin

Posted on 09/23/2009 5:45:59 PM PDT by BGHater

The mixing of two distinct lineages led to most modern-day Indians.

The population of India was founded on two ancient groups that are as genetically distinct from each other as they are from other Asians, according to the largest DNA survey of Indian heritage to date. Nowadays, however, most Indians are a genetic hotchpotch of both ancestries, despite the populous nation's highly stratified social structure.

"All Indians are pretty similar," says Chris Tyler-Smith, a genome researcher at the Wellcome Trust Sanger Institute near Cambridge, UK, who was not involved in the study. "The population subdivision has not had a dominating effect."

India makes up around one-sixth of the world's population, yet the South Asian country has been sorely under-represented in genome-wide studies of human genetic variation. The International HapMap Project, for example, includes populations with African, East Asian and European ancestry — but no Indians. The closest the Human Genome Diversity Cell Line Panel of 51 global populations comes is Pakistan, India's western neighbour. The Indian Genome Variation database was launched in 2003 to fill the gap, but so far the project has studied only 420 DNA-letter differences, called single nucleotide polymorphisms (SNPs), in 75 genes1. Caste divisions

Now, a team led by David Reich of the Broad Institute in Cambridge, Massachusetts, and Lalji Singh of the Centre for Cellular and Molecular Biology in Hyderabad, India, has probed more than 560,000 SNPs across the genomes of 132 Indian individuals from 25 diverse ethnic and tribal groups dotted all over India.

The researchers showed that most Indian populations are genetic admixtures of two ancient, genetically divergent groups, which each contributed around 40-60% of the DNA to most present-day populations. One ancestral lineage — which is genetically similar to Middle Eastern, Central Asian and European populations — was higher in upper-caste individuals and speakers of Indo-European languages such as Hindi, the researchers found. The other lineage was not close to any group outside the subcontinent, and was most common in people indigenous to the Andaman Islands, a remote archipelago in the Bay of Bengal.

The researchers also found that Indian populations were much more highly subdivided than European populations. But whereas European ancestry is mostly carved up by geography, Indian segregation was driven largely by caste. "There are populations that have lived in the same town and same village for thousands of years without exchanging genes," says Reich. Number puzzle

Indian populations, although currently huge in number, were also founded by relatively small bands of individuals, the study suggests. Overall, the picture that emerges is of ancient genetic mixture, says Reich, followed by fragmentation into small, isolated ethnic groups, which were then kept distinct for thousands of years because of limited intermarriage — a practice also known as endogamy.

This genetic evidence refutes the claim that the Indian caste structure was a modern invention of British colonialism, the authors say. "This idea that caste is thousands of years old is a big deal," says Nicole Boivin, an archaeologist who studies South Asian prehistory at the University of Oxford, UK. "To say that endogamy goes back so far, and that genetics shows it, is going to be controversial to many anthropologists." Boivin fears that the study might be 'spun' by politicians seeking to maintain caste structures in India, and she calls on social scientists and geneticists to collaborate on such "highly politicized" issues.

Beyond the study's social repercussions, the low rates of genetic mingling "could have important implications for biomedical studies of Indian populations", notes Sarah Tishkoff, a human geneticist at the University of Pennsylvania in Philadelphia who was not involved in the research. The partitioned population structure will need to be taken into account in any efforts to map disease genes, she says.

The small numbers of founders of each Indian group also have clinical consequences, says Reich. "There will be a lot of recessive diseases in India that will be different in each population and that can be searched for and mapped genetically," he says. "That will be important for health in India."

The evidence that most Indians are genetically alike, even though anthropological data show that Indian groups tend to marry within their own group, is "very puzzling", says Aravinda Chakravarti, a human molecular geneticist at the Johns Hopkins University School of Medicine in Baltimore, Maryland, who wrote an accompanying News & Views article3. For example, Chakravarti notes that the study can't establish a rough date for when the ancient mixing between the two ancestral populations took place. "There are very curious features of the data that are hard to explain," he says, adding: "This is not the end of the story."

* References

1. Indian Genome Variation Consortium J. Genet. 87, 3-20 (2008).
2. Reich, D. et al. Nature 461, 489-494 (2009).
3. Chakravarti, A. Nature 461, 487-488 (2009).


TOPICS: History; Science; Society
KEYWORDS: ancestry; andamanislands; aramaic; aryaninvasion; aryans; ashokaspillars; caste; creation; dna; edictsofashoka; emptydna; epigraphyandlanguage; evolution; genetics; genome; godsgravesglyphs; helixmakemineadouble; india; indusvalley; indusvalleyscript; mauryanempire; mesopotamia; mtdna; parsimoniousness
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To: colorado tanker

There isn’t any way for DNA to show geographical origin, although some kind of common ancestry or other close relationship can sometimes be shown between two individuals sometimes separated by great expanses of time. :’)

The caste system may be medieval in origin; it wasn’t ubiquitous in ancient India, and probably wasn’t introduced by the Moslem invasion, though the rigid enforcement of the caste system may have been either imposed by the Muzzies, or (IMHO more likely) a response to the domination of India by a fairly small Muzzie minority.

Vegetarianism in India didn’t catch on until what we’d call late antiquity, and again didn’t become near-universal until sometime in the Middle Ages, again, possibly in response to the Muzzie domination.

When Ashoka conquered his empire, he then went Buddhist and repudiated violence (at least by word). He put pillars around the frontiers, with the same message, but each in the local language. Two or three of those were in Aramaic, and erected in what is now Afghanistan.


61 posted on 09/24/2009 7:36:47 PM PDT by SunkenCiv (https://secure.freerepublic.com/donate/__Since Jan 3, 2004__Profile updated Monday, January 12, 2009)
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To: SunkenCiv
DNA can show "geographic" information if you have dead frozen bodies in the tundra. Otherwise there are always questions.

Currently the medical researchers in Finland, Sweden, Norway and Russia are focusing on such bodies because they have an historic "living population" right there and can match DNA from thousands of years ago with modern DNA in the same gene groups.

I've caught sight of some similar work with Eskimos in this country and Canada.

62 posted on 09/25/2009 7:07:23 AM PDT by muawiyah
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To: Rookie Cookie
Very interesting that Dravidian language survives in Iran & Pakistan. I'd like to learn more about that, if you can supply some references.

As for invaders wiping out indigenous people, that may have happened to a large extent in the U.S. and Canada, but certainly not farther south. The population of Mexico and many other "Latin" American countries is mixed, with a heavy admixture of indigenous Indian blood. Yet the language is Indo-European (Spanish) for most of these people. So Latin America provides an excellent model of how invasion and conquest could change language and introduce social stratification without exterminating the native people. I think that is what happened in India, and probably in many other places, like Britain, for example.

63 posted on 09/25/2009 11:02:36 AM PDT by hellbender
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To: Rookie Cookie

I suspect the situation is more complex. The Andamanese simply do not look much like south Indians. The latter lack peppercorn hair, steatopygia, and other Andamanese traits. There is also another “primitive” indigenous population to be considered: the Veddoids, who resemble Aussie aborigines more than Andamanese.


64 posted on 09/25/2009 11:05:56 AM PDT by hellbender
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To: Rookie Cookie

Caste is a fundamental part of Hinduism. In fact, some Hindu “religious” scriptures are little more than glorifications of the conquest of the dark-skinned people by the Aryan invaders. Neither Islam nor Christianity have caste as an integral part of their culture. If that were not so, why would Dalits be so inclined to convert to Christianity, more than other groups?


65 posted on 09/25/2009 11:09:15 AM PDT by hellbender
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