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Evolution's Little Helper: Xeroxed Genes
ScienceNOW Daily News ^ | 3 September 2009 | Elizabeth Pennisi

Posted on 09/05/2009 12:33:45 AM PDT by neverdem

Enlarge ImagePicture of carp

Good catch. Using zebrafish, researchers were able to track down the gene that causes this giant mirror carp to have few, large scales.

Credit: Oliver Hasselhoff

A long-standing question in biology is how evolution tinkers with genes without mucking things up. The prevailing theory is that the genome has copies of critical genes, so that if mutations spoil one, there's a backup. Now researchers have new proof that evolution can work this way.

The scientists tracked down a duplicated gene that made possible so-called mirror fish, which have large, reflective scales. "This is a valuable proof of concept that beautifully illustrates how gene and genome duplications can facilitate morphological evolution," says R. Craig Albertson, an evolutionary biologist at Syracuse University in New York state.

Biologists Matthew Harris and Nicholas Rohner of the Max Planck Institute for Developmental Biology in Tübingen, Germany, started their experiment by using chemicals to mutate zebrafish genes. They then scanned the mutant fish for unusual traits. One mutant was almost scaleless, reminiscent of domesticated mirror carp bred to lack many scales to be easy to clean. The researchers tracked the mutation down to a gene called fibroblast growth factor receptor 1 (fgfr1).

Because mutations in this gene typically cause mammal and fish embryos to die, Harris and Rohner suspected it must have a twin somewhere else in the zebrafish genome. It did. The researchers found an intact version of fgfr1, in addition to the mutated copy that leads to mirror scales.

To see if the process of duplication and mutation happens outside the lab, Harris and Rohner scanned for fgfr1 in mirror carp. They found duplicate fgfr1 genes in two varieties of mirror carp: One had lost 111 bases from the twin gene, and another had a base substitution in the twin gene, both of which had presumably led to fewer scales. The team reports its findings online today in Current Biology.

This is the first duplicated gene that Harris and Rohner have discovered, but they expect to find many more. About 25% of the zebrafish's 17,000 genes are duplicated, and those that are mutated may also exist in wild animals as well as domesticated ones.


TOPICS: Culture/Society; News/Current Events; Testing
KEYWORDS: cnv; copynumbervariation; creation; evolution; genetics; godsgravesglyphs; health
Copy number variation, cnv, in genes strikes again.
1 posted on 09/05/2009 12:33:46 AM PDT by neverdem
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To: neverdem

Explain how a basic (relatively speaking) 2-chamber heart circulatory system can evolve into the very complex 4 chamber or double heart system.


2 posted on 09/05/2009 12:41:04 AM PDT by LukeL (Yasser Arafat: "I'd kill for a Nobel Peace Prize")
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To: LukeL

Lungfish


3 posted on 09/05/2009 12:43:55 AM PDT by neverdem (Xin loi minh oi)
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To: LukeL
Explain how a basic (relatively speaking) 2-chamber heart circulatory system can evolve into the very complex 4 chamber or double heart system.

You don't have to explain it, just draw a sweeping arrow on a chart between the two. Sort of fade the start end, and that's all you ever need.

4 posted on 09/05/2009 2:06:09 AM PDT by BRK
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To: neverdem
A typically badly-written science article. The point isn't that a duplicated gene is a safety backup, it's that two normal copies give an effect different from that of one normal copy and one mutant. And the article doesn't mention whether there's any similarity between the mutant variants, so we don't know whether the mutant variants are doing anything at all.

I have a serious question for you creationists. About how many of these anti-evolution arguments do you have at hand, and can you remember ever seeing any of them refuted?
5 posted on 09/05/2009 5:28:17 AM PDT by xenophiles
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To: LukeL
A plausible explanation might be that a genetic mutation causes multiple "two chamber" hearts to form, much in the same way that similar genetic "misfires" cause people to have six fingers, or three sets of teeth.

With a "double pumper", an organism might have better survival traits, and the genetic "defect" is preserved, and futher mutates into the 4 chambered hearts we see today.
6 posted on 09/05/2009 6:24:54 AM PDT by Rebel_Ace (Tags?!? Tags?!? We don' neeeed no stinkin' Tags!)
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To: neverdem

Are we surprised that genes have error-correcting mechanisms in them, considering how much error-correction and damage-control organisms already have?

This neither proves or disproves evolution. An evolutionist will say, “See, you can muck up the genetic sequence, and still get a viable animal”, and the ID guy will say, “What a smart designer to have an error-correction mechanisms built into the design”.


7 posted on 09/05/2009 7:11:50 AM PDT by kosciusko51
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To: xenophiles; kosciusko51
A typically badly-written science article. The point isn't that a duplicated gene is a safety backup, it's that two normal copies give an effect different from that of one normal copy and one mutant.

"Because mutations in this gene typically cause mammal and fish embryos to die, Harris and Rohner suspected it must have a twin somewhere else in the zebrafish genome. It did. The researchers found an intact version of fgfr1, in addition to the mutated copy that leads to mirror scales.

"To see if the process of duplication and mutation happens outside the lab, Harris and Rohner scanned for fgfr1 in mirror carp. They found duplicate fgfr1 genes in two varieties of mirror carp: One had lost 111 bases from the twin gene, and another had a base substitution in the twin gene, both of which had presumably led to fewer scales."

IMHO, they're alluding to two pairs of genes for fgfr1, not simple Mendelian genetics with a pair of dominant and recessive alleles, but copy number variation(cnv).

A Microhomology-Mediated Break-Induced Replication Model for the Origin of Human Copy Number Variation

I only read this citation's abstract so far, but it's a review article. I've posted other articles about cnv that you can find clicking on the appropriate keywords.

P.S. I'm not interested in proving or disproving evolution. I can live with it, just like the Roman Catholic Church does. Different human populations have various copy number variations for amylases.

8 posted on 09/05/2009 10:15:38 AM PDT by neverdem (Xin loi minh oi)
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9 posted on 09/06/2009 12:33:58 AM PDT by neverdem (Xin loi minh oi)
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To: LukeL
First, it becomes a 5 chamber heart system ~ like crocodiles have. The rest is simple.
10 posted on 09/06/2009 4:06:00 AM PDT by muawiyah
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To: Rebel_Ace

Oh, you have to have lungs first ~ that’s what the atrial chambers do ~ pump blood through the lungs. No lungs, no need for four chambers.


11 posted on 09/06/2009 4:07:19 AM PDT by muawiyah
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12 posted on 09/06/2009 6:44:29 PM PDT by SunkenCiv (https://secure.freerepublic.com/donate/__Since Jan 3, 2004__Profile updated Monday, January 12, 2009)
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