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Researchers Trace Evolution to Relatively Simple Genetic Changes
Howard Hughes Medical Institute ^ | 25 Narcg 2005 | Staff

Posted on 05/31/2005 12:03:06 PM PDT by PatrickHenry

In a stunning example of evolution at work, scientists have now found that changes in a single gene can produce major changes in the skeletal armor of fish living in the wild.

The surprising results, announced in the March 25, 2005, issue of journal Science, bring new data to long-standing debates about how evolution occurs in natural habitats.

“Our motivation is to try to understand how new animal types evolve in nature,” said molecular geneticist David M. Kingsley, a Howard Hughes Medical Institute investigator at the Stanford University School of Medicine. “People have been interested in whether a few genes are involved, or whether changes in many different genes are required to produce major changes in wild populations.”

The answer, based on new research, is that evolution can occur quickly, with just a few genes changing slightly, allowing newcomers to adapt and populate new and different environments.

In collaboration with zoologist Dolph Schluter, at the University of British Columbia, Vancouver, Canada, and Rick Myers and colleagues at Stanford, Kingsley and graduate student Pamela F. Colosimo focused on a well-studied little fish called the stickleback. The fish — with three bony spines poking up from their backs — live both in the seas and in coastal fresh water habitats all around the northern hemisphere.


Wild populations of stickleback fish have evolved major changes in bony armor styles (shaded) in marine and freshwater environments. New research shows that this evolutionary shift occurs over and over again by increasing the frequency of a rare genetic variant in a single gene.

Sticklebacks are enormously varied, so much so that in the 19th century naturalists had counted about 50 different species. But since then, biologists have realized most populations are recent descendants of marine sticklebacks. Marine fish colonized new freshwater lakes and streams when the last ice age ended 10,000 to 15,000 years ago. Then they evolved along separate paths, each adapting to the unique environments created by large scale climate change.

“There are really dramatic morphological and physiological adaptations” to the new environments, Kingsley said.

For example, “sticklebacks vary in size and color, reproductive behavior, in skeletal morphology, in jaws and teeth, in the ability to tolerate salt and different temperatures at different latitudes,” he said.

Kingsley, Schluter and their co-workers picked one trait — the fish's armor plating — on which to focus intense research, using the armor as a marker to see how evolution occurred. Sticklebacks that still live in the oceans are virtually covered, from head to tail, with bony plates that offer protection. In contrast, some freshwater sticklebacks have evolved to have almost no body armor.

“It's rather like a military decision, to be either heavily armored and slow, or to be lightly armored and fast,” Kingsley said. “Now, in countless lakes and streams around the world these low-armored types have evolved over and over again. It's one of the oldest and most characteristic differences between stickleback forms. It's a dramatic change: a row of 35 armor plates turning into a small handful of plates - or even no plates at all.”

Using genetic crosses between armored and unarmored fish from wild populations, the research team found that one gene is what makes the difference.

“Now, for the first time, we've been able to identify the actual gene that is controlling this trait,” the armor-plating on the stickleback, Kingsley said

The gene they identified is called Eda, originally named after a human genetic disorder associated with the ectodysplasin pathway, an important part of the embryonic development process. The human disorder, one of the earliest ones studied, is called ectodermal dysplasia.

“It's a famous old syndrome,” Kingsley said. “Charles Darwin talked about it. It's a simple Mendelian trait that controls formation of hair, teeth and sweat glands. Darwin talked about `the toothless men of Sind,' a pedigree (in India) that was striking because many of the men were missing their hair, had very few teeth, and couldn't sweat in hot weather. It's a very unusual constellation of symptoms, and is passed as a unit through families.”

Research had already shown that the Eda gene makes a protein, a signaling molecule called ectodermal dysplasin. This molecule is expressed in ectodermal tissue during development and instructs certain cells to form teeth, hair and sweat glands. It also seems to control the shape of - bones in the forehead and nose.

Now, Kingsley said, “it turns out that armor plate patterns in the fish are controlled by the same gene that creates this clinical disease in humans. And this finding is related to the old argument whether Nature can use the same genes and create other traits in other animals.”

Ordinarily, “you wouldn't look at that gene and say it's an obvious candidate for dramatically changing skeletal structures in wild animals that end up completely viable and healthy,' he said. "Eda gene mutations cause a disease in humans, but not in the fish. So this is the first time mutations have been found in this gene that are not associated with a clinical syndrome. Instead, they cause evolution of a new phenotype in natural populations.”

The research with the wild fish also shows that the same gene is used whenever the low armor trait evolves. “We used sequencing studies to compare the molecular basis of this trait across the northern hemisphere,” said Kingsley. “It doesn't matter where we look, on the Pacific coast, the East coast, in Iceland, everywhere. When these fish evolve this low-armored state they are using the same genetic mechanism. It's happening over and over again. It makes them more fit in all these different locations.”

Because this trait evolves so rapidly after ocean fish colonize new environments, he added, “we wondered whether the genetic variant (the mutant gene) that controls this trait might still exist in the ocean fish. So we collected large numbers of ocean fish with complete armor, and we found a very low level of this genetic variant in the marine population.”

So, he said, “the marine fish actually carry the genes for this alternative state, but at such a low level it is never seen;” all the ocean fish remain well-armored. “But they do have this silent gene that allows this alternative form to emerge if the fish colonize a new freshwater location.”

Also, comparing what happens to the ectodysplasin signaling molecule when its gene is mutated in humans, and in fish, shows a major difference. The human protein suffers "a huge amount of molecular lesions, including deletions, mutations, many types of lesions that would inactivate the protein," Kingsley said.

But in contrast, “in the fish we don't see any mutations that would clearly destroy the protein.” There are some very minor changes in many populations, but these changes do not affect key parts of the molecule. In addition, one population in Japan used the same gene to evolve low armor, but has no changes at all in the protein coding region. Instead, Kingsley said, “the mutations that we have found are, we think, in the (gene's) control regions, which turns the gene on and off on cue.” So it seems that evolution of the fish is based on how the Eda gene is used; how, when and where it is activated during embryonic growth.

Also, to be sure they're working with the correct gene, the research team used genetic engineering techniques to insert the armor-controlling gene into fish “that are normally missing their armor plates. And that puts the plates back on the sides of the fish,” Kingsley said.

“So, this is one of the first cases in vertebrates where it's been possible to track down the genetic mechanism that controls a dramatic change in skeletal pattern, a change that occurs naturally in the wild,” he noted.

“And it turns out that the mechanisms are surprisingly simple. Instead of killing the protein (with mutations), you merely adjust the way it is normally regulated. That allows you to make a major change in a particular body region - and produces a new type of body armor without otherwise harming the fish.”


TOPICS: Culture/Society; Miscellaneous; Philosophy
KEYWORDS: crevolist; evolution; genetics; godsgravesglyphs; helixmakemineadouble; massextinction; ordovician; phenryjerkalert; trilobite; trilobites
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To: Right Wing Professor

Yes, I know that about the Jesuits. It was a typo, I meant to type 16th century. Very typical Jesuitical retort. Sorry. End of discussion.


341 posted on 06/01/2005 11:46:08 AM PDT by blueblazes
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To: Right Wing Professor

"This is your problem, though. You make statements in support of your position, and when someone points ouit those statements are either hilariously wrong or hilariously contradictory, you try to pretend it doesn't matter. But in fact, once all the complete nonsense is stripped away, all you've posted can be reduced to one rant 'EVOLUTION IS A BELIEF, BECAUSE IS SAY SO!!!'. Your mind is made up, and facts confuse you."



I guess now would be the wrong time to highlight the grammatical errors in this so called "ENGLISH" paragraph. ;) j/k no flames please


342 posted on 06/01/2005 11:49:34 AM PDT by darbymcgill
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To: darbymcgill
I guess now would be the wrong time to highlight the grammatical errors in this so called "ENGLISH" paragrap

I see a couple of typos, but no grammatical errors.

343 posted on 06/01/2005 11:50:36 AM PDT by Right Wing Professor
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To: Right Wing Professor
Exactly what I would expect from a scientist. We never make mistakes, we just converge on the true English as we see it.

Should we give the same credence to your Chemistry as we do your English?
344 posted on 06/01/2005 11:54:09 AM PDT by darbymcgill
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To: Right Wing Professor

you do notice the difference between PH's paper, and this paper?


345 posted on 06/01/2005 11:56:38 AM PDT by flevit
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To: darbymcgill
Exactly what I would expect from a scientist. We never make mistakes, we just converge on the true English as we see it.

Given the views you've expressed here, I really don't care what you expect, since it's almost certainly wrong.

Should we give the same credence to your Chemistry as we do your English?

If you confuse grammar and typing, who knows what you'd make of chemistry?

346 posted on 06/01/2005 11:58:45 AM PDT by Right Wing Professor
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To: PetroniusMaximus
"Well, for one thing we've got eyewitness accounts of seraphim and cherubim."

Eyewitness accounts are notoriously faulty. That is why forensic science is used increasing more often and witness use is decreasing in courts.

I've read books that claim UFOs exist because people have seen them. Should I believe them, or the book for that matter, on that basis?

347 posted on 06/01/2005 11:59:20 AM PDT by b_sharp (Science adjusts theories to fit evidence, creationism distorts evidence to fit the Bible.)
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To: flevit
you do notice the difference between PH's paper, and this paper?

More than one gene is involved in the genesis of any given body part.

348 posted on 06/01/2005 12:00:11 PM PDT by Right Wing Professor
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To: EternalVigilance
"If you don't care about the Lord, what could possibly lead you to give a rip about anybody else once the chips are down? "

Well then, its a good thing that evolution has also given us kin selection and the resulting interest in protecting others isn't it.

349 posted on 06/01/2005 12:02:33 PM PDT by b_sharp (Science adjusts theories to fit evidence, creationism distorts evidence to fit the Bible.)
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To: Right Wing Professor

I suppose it matters not to you that i made 3 attempts to make it clear I was kidding. They obviously flew over your head. see above ;) = a wink, j/k = just kidding, and no flames = another common form of a joke.

You and your buddy Vade must come from the same scientific school of persuasion. When someone notes a boo boo you made, you don't apologize or take it in the light it was given, you attack the messenger. Very good technique. Does this mean you win? Do I roll over now?

I suggest you do as you so arragantly suggest to others you have derided. Subject this paragraph to your English department peers and NU and get back with me. Seek out enlightenment and you will be made un-ignorant in the matters of grammar.


350 posted on 06/01/2005 12:05:48 PM PDT by darbymcgill
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To: blueblazes
"Evolution is apparently based upon observing similarities in animals at different points in the fossil records and assuming that they are related or that one is "descended" from another because they share common characteristics or appearance."

Common morphology, shared diagnostic features, similar range and ecology, and the changes fit a chronological sequence. Your dismissal of the evidence for common descent is nothing more than a strawman.

351 posted on 06/01/2005 12:09:38 PM PDT by b_sharp (Science adjusts theories to fit evidence, creationism distorts evidence to fit the Bible.)
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To: darbymcgill
You and your buddy Vade must come from the same scientific school of persuasion. When someone notes a boo boo you made, you don't apologize or take it in the light it was given, you attack the messenger. Very good technique. Does this mean you win? Do I roll over now?

You pointed it out. I said it was a typo. Then you launched into 'just what I'd expect from a scientist'. Don't dish it out if you can't take it.

I suggest you do as you so arragantly suggest to others you have derided. Subject this paragraph to your English department peers and NU and get back with me. Seek out enlightenment and you will be made un-ignorant in the matters of grammar.

That's 'arrogantly'.

352 posted on 06/01/2005 12:10:07 PM PDT by Right Wing Professor
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To: Right Wing Professor
Thank you so much for pointing that out. I will strive to use the spell checker in lieu of haste for future posts.

I'll dispense with the usual 'you hit me first' and your scientific name calling .

I said it was a typo

Is this what you so eloquently refer to as "quote mining"?

What you posted was...

I see a couple of typos, but no grammatical errors.

So are you telling me there are no grammatical errors or are you telling me you don't see any? Maybe the question should be are there no grammatical errors because YOU don't see them?
353 posted on 06/01/2005 12:26:19 PM PDT by darbymcgill
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To: Steve_Seattle
"I don't think most critics of evolution would dispute that your pics might constitute a limited form of micro-evolution,"

An artiodactyl (two toed ungulate) evolving into a legless, finned animal completely adapted to salt water oceans and you call that a limited form of micro-evolution.

Do I sense the goal posts moving again?

354 posted on 06/01/2005 12:26:23 PM PDT by b_sharp (Science adjusts theories to fit evidence, creationism distorts evidence to fit the Bible.)
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To: darbymcgill
Is this what you so eloquently refer to as "quote mining"?

No. Quote mining is when you take one phrase out of context and try to use it to pretend the author said something he didn't intend to say - in fact, often the exact opposite of what he was trying to say.

So are you telling me there are no grammatical errors or are you telling me you don't see any?

I'm telling you what I told you. I see typos, but no grammatical errors. If you disagree, feel free to identify same.

355 posted on 06/01/2005 12:32:41 PM PDT by Right Wing Professor
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To: b_sharp
Do I sense the goal posts moving again?

Compared with creationist goal posts, hockey goals are anchored in concrete.

356 posted on 06/01/2005 12:34:19 PM PDT by Right Wing Professor
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To: blueblazes
" THere is no proof of it because proof is science is the ability to reproduce a result. "

Reproduce a conclusion based on logic and statistical analysis.

357 posted on 06/01/2005 12:34:31 PM PDT by b_sharp (Science adjusts theories to fit evidence, creationism distorts evidence to fit the Bible.)
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To: Blood of Tyrants
"The biggest sin that an evolutionist can commit is to question the theory. In that area you appear to be blameless."

Evolutionary biologists question portions of evolution all the time. This will go on as long as new information and techniques can be applied.

358 posted on 06/01/2005 12:37:01 PM PDT by b_sharp (Science adjusts theories to fit evidence, creationism distorts evidence to fit the Bible.)
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To: Right Wing Professor
no, that the genesis of body parts in "your" paper is "suggested" or one possible explination of the observation of similar morphology/genetics. In PH's The "removal" of a preexisting body part(s) are in and of itself observational.
359 posted on 06/01/2005 12:40:25 PM PDT by flevit
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To: flevit

Oh well, I tried leading the horse to water...


360 posted on 06/01/2005 12:44:34 PM PDT by Right Wing Professor
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