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Researchers Trace Evolution to Relatively Simple Genetic Changes
Howard Hughes Medical Institute ^ | 25 Narcg 2005 | Staff

Posted on 05/31/2005 12:03:06 PM PDT by PatrickHenry

In a stunning example of evolution at work, scientists have now found that changes in a single gene can produce major changes in the skeletal armor of fish living in the wild.

The surprising results, announced in the March 25, 2005, issue of journal Science, bring new data to long-standing debates about how evolution occurs in natural habitats.

“Our motivation is to try to understand how new animal types evolve in nature,” said molecular geneticist David M. Kingsley, a Howard Hughes Medical Institute investigator at the Stanford University School of Medicine. “People have been interested in whether a few genes are involved, or whether changes in many different genes are required to produce major changes in wild populations.”

The answer, based on new research, is that evolution can occur quickly, with just a few genes changing slightly, allowing newcomers to adapt and populate new and different environments.

In collaboration with zoologist Dolph Schluter, at the University of British Columbia, Vancouver, Canada, and Rick Myers and colleagues at Stanford, Kingsley and graduate student Pamela F. Colosimo focused on a well-studied little fish called the stickleback. The fish — with three bony spines poking up from their backs — live both in the seas and in coastal fresh water habitats all around the northern hemisphere.


Wild populations of stickleback fish have evolved major changes in bony armor styles (shaded) in marine and freshwater environments. New research shows that this evolutionary shift occurs over and over again by increasing the frequency of a rare genetic variant in a single gene.

Sticklebacks are enormously varied, so much so that in the 19th century naturalists had counted about 50 different species. But since then, biologists have realized most populations are recent descendants of marine sticklebacks. Marine fish colonized new freshwater lakes and streams when the last ice age ended 10,000 to 15,000 years ago. Then they evolved along separate paths, each adapting to the unique environments created by large scale climate change.

“There are really dramatic morphological and physiological adaptations” to the new environments, Kingsley said.

For example, “sticklebacks vary in size and color, reproductive behavior, in skeletal morphology, in jaws and teeth, in the ability to tolerate salt and different temperatures at different latitudes,” he said.

Kingsley, Schluter and their co-workers picked one trait — the fish's armor plating — on which to focus intense research, using the armor as a marker to see how evolution occurred. Sticklebacks that still live in the oceans are virtually covered, from head to tail, with bony plates that offer protection. In contrast, some freshwater sticklebacks have evolved to have almost no body armor.

“It's rather like a military decision, to be either heavily armored and slow, or to be lightly armored and fast,” Kingsley said. “Now, in countless lakes and streams around the world these low-armored types have evolved over and over again. It's one of the oldest and most characteristic differences between stickleback forms. It's a dramatic change: a row of 35 armor plates turning into a small handful of plates - or even no plates at all.”

Using genetic crosses between armored and unarmored fish from wild populations, the research team found that one gene is what makes the difference.

“Now, for the first time, we've been able to identify the actual gene that is controlling this trait,” the armor-plating on the stickleback, Kingsley said

The gene they identified is called Eda, originally named after a human genetic disorder associated with the ectodysplasin pathway, an important part of the embryonic development process. The human disorder, one of the earliest ones studied, is called ectodermal dysplasia.

“It's a famous old syndrome,” Kingsley said. “Charles Darwin talked about it. It's a simple Mendelian trait that controls formation of hair, teeth and sweat glands. Darwin talked about `the toothless men of Sind,' a pedigree (in India) that was striking because many of the men were missing their hair, had very few teeth, and couldn't sweat in hot weather. It's a very unusual constellation of symptoms, and is passed as a unit through families.”

Research had already shown that the Eda gene makes a protein, a signaling molecule called ectodermal dysplasin. This molecule is expressed in ectodermal tissue during development and instructs certain cells to form teeth, hair and sweat glands. It also seems to control the shape of - bones in the forehead and nose.

Now, Kingsley said, “it turns out that armor plate patterns in the fish are controlled by the same gene that creates this clinical disease in humans. And this finding is related to the old argument whether Nature can use the same genes and create other traits in other animals.”

Ordinarily, “you wouldn't look at that gene and say it's an obvious candidate for dramatically changing skeletal structures in wild animals that end up completely viable and healthy,' he said. "Eda gene mutations cause a disease in humans, but not in the fish. So this is the first time mutations have been found in this gene that are not associated with a clinical syndrome. Instead, they cause evolution of a new phenotype in natural populations.”

The research with the wild fish also shows that the same gene is used whenever the low armor trait evolves. “We used sequencing studies to compare the molecular basis of this trait across the northern hemisphere,” said Kingsley. “It doesn't matter where we look, on the Pacific coast, the East coast, in Iceland, everywhere. When these fish evolve this low-armored state they are using the same genetic mechanism. It's happening over and over again. It makes them more fit in all these different locations.”

Because this trait evolves so rapidly after ocean fish colonize new environments, he added, “we wondered whether the genetic variant (the mutant gene) that controls this trait might still exist in the ocean fish. So we collected large numbers of ocean fish with complete armor, and we found a very low level of this genetic variant in the marine population.”

So, he said, “the marine fish actually carry the genes for this alternative state, but at such a low level it is never seen;” all the ocean fish remain well-armored. “But they do have this silent gene that allows this alternative form to emerge if the fish colonize a new freshwater location.”

Also, comparing what happens to the ectodysplasin signaling molecule when its gene is mutated in humans, and in fish, shows a major difference. The human protein suffers "a huge amount of molecular lesions, including deletions, mutations, many types of lesions that would inactivate the protein," Kingsley said.

But in contrast, “in the fish we don't see any mutations that would clearly destroy the protein.” There are some very minor changes in many populations, but these changes do not affect key parts of the molecule. In addition, one population in Japan used the same gene to evolve low armor, but has no changes at all in the protein coding region. Instead, Kingsley said, “the mutations that we have found are, we think, in the (gene's) control regions, which turns the gene on and off on cue.” So it seems that evolution of the fish is based on how the Eda gene is used; how, when and where it is activated during embryonic growth.

Also, to be sure they're working with the correct gene, the research team used genetic engineering techniques to insert the armor-controlling gene into fish “that are normally missing their armor plates. And that puts the plates back on the sides of the fish,” Kingsley said.

“So, this is one of the first cases in vertebrates where it's been possible to track down the genetic mechanism that controls a dramatic change in skeletal pattern, a change that occurs naturally in the wild,” he noted.

“And it turns out that the mechanisms are surprisingly simple. Instead of killing the protein (with mutations), you merely adjust the way it is normally regulated. That allows you to make a major change in a particular body region - and produces a new type of body armor without otherwise harming the fish.”


TOPICS: Culture/Society; Miscellaneous; Philosophy
KEYWORDS: crevolist; evolution; genetics; godsgravesglyphs; helixmakemineadouble; massextinction; ordovician; phenryjerkalert; trilobite; trilobites
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To: PatrickHenry
The day the creationists ever discover anything that contradicts evolution -- or ever discover anything at all for that matter, so far their record is a flat zero -- will be most interesting. I'm waiting ...

Wouldn't that entail some actual research besides quote-mining?

141 posted on 05/31/2005 2:51:51 PM PDT by VadeRetro ( Liberalism is a cancer on society. Creationism is a cancer on conservatism.)
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To: johnnyb_61820
One of the characteristics of such dogs is usually the great mutational load that they carry. This is indicative of the creationist model, where mutations that are carried within the population are normally bad.

There is a creationist model and not just a grab-bag of talking points!!?? Er, no. You mean, "One of the talkiing points is 'All mutations are bad, bad, bad!'"

Have you read the lead article of this thread? Your talking point is wrong, wrong, wrong.

142 posted on 05/31/2005 2:55:21 PM PDT by VadeRetro ( Liberalism is a cancer on society. Creationism is a cancer on conservatism.)
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To: PatrickHenry

That would be Micro-evolution as Macro-evolution does not exist as far as anyone knows.


143 posted on 05/31/2005 2:55:54 PM PDT by fish hawk (I am only one, but I am not the only one.)
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To: orionblamblam
The Gods of Washington and Lincoln were quite unlike those of Paul, given that Washington was at best ambivalent (he went to church and mouthed some platitudes, but was noted for expressing privately virtually no interest) and Lincoln likely atheist.

Ha ha ha...there's that silliness I was referring to awhile ago.

Again, why should we take the word about what may or may not have occurred thousands of years ago from those who don't even understand the plain history of these United States over four centuries?

144 posted on 05/31/2005 3:00:01 PM PDT by EternalVigilance ("We, the people, are the rightful masters of both Congress and the courts..." -Abraham Lincoln)
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To: Dimensio

"Which one? Brhaman? Zeus? Odin?"

One of the interesting things about your post is that it brings up one of my favorite subjects -- that God has been involved with all of the peoples of the world. In fact, even behind many of the animist religions there exists belief in a one, true sovereign God, it's just usually that they have been distanced from that God and do not think that He cares for them. Often times when missionaries contact these people, they say, essentially, "is it true that (insert their name for God here) still cares for us?"

Here's a great book on the subject:

http://www.amazon.com/exec/obidos/redirect?path=ASIN/0830709258&link_code=as2&camp=1789&tag=freeeducation-20&creative=9325


145 posted on 05/31/2005 3:02:43 PM PDT by johnnyb_61820
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To: mysterio

From http://jmm.aaa.net.au/articles/2094.htm

"[If a scholar] tells me that something in a Gospel is legend or romance, I want to know how many legends and romances he has read, how well his palate is trained in detecting them by the flavour..."


146 posted on 05/31/2005 3:03:48 PM PDT by johnnyb_61820
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To: furball4paws
There were between 2-5,000,000 American Indians here when the white man arrived. Not one of them was a christian.

Why do you insist on throwing dust into the air? When I say American, you know what I mean.

In fact, to make my point clear to those who so obviously want to obfuscate, I have repeatedly referenced 'the last four hundred years'. You did observe that, did you not?

147 posted on 05/31/2005 3:06:03 PM PDT by EternalVigilance ("We, the people, are the rightful masters of both Congress and the courts..." -Abraham Lincoln)
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To: PatrickHenry
10. Craterists can produce micro-craters, but have no evidence of macro-cratering.

You know, you're right. Macro-cratering would need a different mechanism, since we don't see it happening every day.

148 posted on 05/31/2005 3:06:26 PM PDT by VadeRetro ( Liberalism is a cancer on society. Creationism is a cancer on conservatism.)
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To: EternalVigilance

The fact in post 136 still stands. And has been posted to you there are many types of Americans, not just American Indians. Islam is well entrenched here as are hindus and buddhists and assorted other Asian religions. And if you live in California, well then........

These are all American, just as you. You insult them by implying their religious beliefs are worthless. Because you are christian does that make you superior to them?


149 posted on 05/31/2005 3:14:53 PM PDT by furball4paws (One of the last Evil Geniuses, or the first of their return.)
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To: js1138
"Crocks and alligators are pretty much unchanged for 200 million years. Evolution doesn't say things automatically change. It says that variations differ in the number of offspring they produce. Sometimes the originals are good enough."


that "theory" sounds a bit familiar...

"and the goo said, 'let there be alligators' and alligators were puked out of the goo, and the goo said, 'good, now on to the not-so-good originals that evolve over billions of years into humans' and the goo puked out a self-replicating amoeba sans flagella...."
150 posted on 05/31/2005 3:29:05 PM PDT by darbymcgill
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To: darbymcgill
Two points:

1) Argument from personal incredulity.

2) Your argument is creationism with a god named "Goo." You obviously only know one story. Creationist models ARE rather silly, aren't they?

151 posted on 05/31/2005 3:37:21 PM PDT by VadeRetro ( Liberalism is a cancer on society. Creationism is a cancer on conservatism.)
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To: johnnyb_61820
If evolution were correct and the 200 million years did occur, I find it hard to believe that the same form that was beneficial in that ecosystem remained beneficial for every ecosystem for the last 200 million years, with the dramatic changes that would have occurred in the populations of other animals.

What in the ecosystems of crocidiles and alligators has changed in the last 200 million years?
152 posted on 05/31/2005 3:38:18 PM PDT by Dimensio (http://angryflower.com/bobsqu.gif <-- required reading before you use your next apostrophe!)
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To: darbymcgill

If you want to talk about amoebas with or without flagella, I'm ready.


153 posted on 05/31/2005 3:41:08 PM PDT by furball4paws (One of the last Evil Geniuses, or the first of their return.)
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To: EternalVigilance

I guess your attempt at distraction is your poor way of admitting that you made claims that you can't support. Specifically, you cannot demonstrate that any one God -- much less the specific one that you worship -- actually exists to the exclusion of all others, nor can you demonstrate that the theory of evolution is a direct attack on this particular God.


154 posted on 05/31/2005 3:42:18 PM PDT by Dimensio (http://angryflower.com/bobsqu.gif <-- required reading before you use your next apostrophe!)
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To: Dimensio

He's just making a Lamarckian reference.


155 posted on 05/31/2005 3:42:52 PM PDT by furball4paws (One of the last Evil Geniuses, or the first of their return.)
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To: furball4paws
These are all American, just as you. You insult them by implying their religious beliefs are worthless. Because you are christian does that make you superior to them?

The dust you've thrown into the air doesn't obscure the fact in the least that the Judeo-Christian God of the Bible, the God of Abraham, Isaac and Jacob, is and always has been the God of most Americans.

156 posted on 05/31/2005 3:52:44 PM PDT by EternalVigilance ("We, the people, are the rightful masters of both Congress and the courts..." -Abraham Lincoln)
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To: Dimensio
I guess your attempt at distraction is your poor way of admitting that you made claims that you can't support. Specifically, you cannot demonstrate that any one God -- much less the specific one that you worship -- actually exists to the exclusion of all others, nor can you demonstrate that the theory of evolution is a direct attack on this particular God.

You can pretend that the purveyors of evolution haven't had an anti-Christian bias and agenda all you want, but that doesn't change the facts in the least. This theory of yours has been atheisms primary vehicle for over a century. And like all man-centered 'isms', it is destructive in more ways than you are ready to face.

157 posted on 05/31/2005 3:55:29 PM PDT by EternalVigilance ("We, the people, are the rightful masters of both Congress and the courts..." -Abraham Lincoln)
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To: Dimensio
"What in the ecosystems of crocidiles and alligators has changed in the last 200 million years?"

Some really smart "scientists" tell us it's a "fact not a theory" that global warming and the shrinking ozone layer are about to evolve us all into crispy critters. Wouldn't the "perfect" alligators have for-seen these changes and begun evolving some level 50 sun block spewing appendages by now?
158 posted on 05/31/2005 3:56:03 PM PDT by darbymcgill
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To: Dimensio
Specifically, you cannot demonstrate that any one God -- much less the specific one that you worship -- actually exists to the exclusion of all others...

I am not trying to 'prove' anything to you at all. That would be comparable to trying to convince Bil Clinton that interns are for doing office work.

159 posted on 05/31/2005 3:58:17 PM PDT by EternalVigilance ("We, the people, are the rightful masters of both Congress and the courts..." -Abraham Lincoln)
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To: EternalVigilance

And so you would jam your religion down their throats, because you are the majority?

Next time the Taliban come recruiting, I'll send them your way.


160 posted on 05/31/2005 3:58:46 PM PDT by furball4paws (One of the last Evil Geniuses, or the first of their return.)
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