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Spotting Evolution on the Wing
Howard Hughes Medical Institute ^ | 04 February 2005 | Staff

Posted on 02/09/2005 7:35:49 AM PST by PatrickHenry

By analyzing the genetic origin of a modest spot on a fruit fly wing, Howard Hughes Medical Institute researchers have discovered a molecular mechanism that explains, in part, how new patterns can evolve. The secret appears to be specific segments of DNA that orchestrate where proteins are used in the construction of an insect's body.

In the February 3, 2005, issue of the journal Nature, HHMI investigator Sean B. Carroll and his colleagues at the University of Wisconsin-Madison, published evidence showing that regions of DNA known as cis-regulatory elements have major evolutionary importance. Cis-regulatory elements are DNA segments that nestle around and even within gene segments that code for specific proteins. Rather than coding for a protein, however, these segments regulate the function of a nearby gene - and can allow for variations in that function depending on the tissue or developmental stage of an organism.


Different species of fruit flies exhibit remarkably different patterns of wing decoration. At the far right is the familiar Drosophila melanogaster, the workhorse model organism of genetics, which differs markedly from other fruit fly species.

“Some biologists, including myself, have for many years suspected that cis-regulatory elements would be key to the evolution of form,” said Carroll. “The essence of our argument has been that proteins can have multiple jobs in the body — at different times and in different tissues. Mutations in a gene's protein-coding region could exact an enormous penalty by affecting the function of that protein throughout the organism. But mutations in a regulatory region could affect only the production of the resulting protein in one setting — allowing fine-scale variation with no collateral damage.

“The amount of direct evidence for the role of cis-regulatory elements in evolution has been very small and very narrow in scope,” he said. “But in this study, we believe we present evidence that is of a smoking-gun variety.”

The researchers chose to study the evolution of the wing spot on the fruit fly because it is a simple trait with a well-understood evolutionary history. While ancient fruit fly species lack the spots, Carroll said, some species that evolved later have developed them under the pressure of sexual selection. The wing spots offer a survival advantage to males, who depend on the decorations to “impress” females to choose them in the mating process.

In fruit flies, wing pigmentation depends on a gene known as yellow, which is found in fly species both with and without the spot. Since differences in the cis-regulatory elements controlling the yellow gene might account for variations in the spot, the researchers began by transferring potential cis-regulatory elements from the spotted species biarmipes into the spot-free species melanogaster. They attached the regulatory region to a gene for a fluorescent protein, and found that that gene was expressed in the spot-free species just as the yellow gene was in the spotted species, demonstrating the importance of the cis-regulatory region.

While the researchers later found evidence that changes in other genes were also involved in evolution of the wing spot, it was clear that evolution of the cis-regulatory regions of yellow was a critical step in the process. They therefore next sought to explore the origin and function of the cis-regulatory region itself. By comparing biarmipes, melanogaster, and other species, the scientists established that mutation of a preexisting regulatory region lead to the evolution of the spot pattern.

Importantly, they discovered that in the species with the wing spot, multiple mutations of the cis-regulatory region had created binding sites for existing regulatory proteins in the cell. By allowing these regulatory proteins to interact with the yellow gene, these new binding sites resulted in formation of a spot pattern. For example, the newly evolved binding sites included ones for a regulatory protein called Engrailed, which was already known to be used by all fruit flies to govern formation of wing structure. Binding of Engrailed to the regulatory region of the yellow gene is a necessary step in development of the wing spot.

“Co-opting” is central to the success of such an evolutionary mechanism, said Carroll. “A key concept here is that this novelty arose from new combinations of old parts,” he said. “Through constant mutation, new binding sites for these existing regulatory proteins randomly evolve. And when the pressure of natural selection makes them create advantageous structures — such as a useful wing spot — they are preserved.”

The evolutionary process of co-opting existing regulatory systems explains why the same structures — such as spots on fly wings — can evolve independently in distantly related species, said Carroll. “The architecture of the wing is old and stable,” he said. “The vein pattern, the sensory organs, the attachment to the body — all are ancient. So, for tens of millions of years, the same proteins have been available to modify patterns on the wings because they are there to do other jobs. When we see the same patterns evolving in distantly related species, we can theorize that it's just the same regulatory alteration of these existing systems happening again and again when selection favors it.

“We like to use a Christmas tree analogy,” said Carroll. “These systems already have all the structural details in place, like the structure of a Christmas tree. And all evolution has to do is to alter these regulatory elements mutationally to bring out a pattern — like hanging ornaments on the tree.”


TOPICS: Culture/Society; Miscellaneous; Philosophy
KEYWORDS: crevolist; evolution
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Fruit flies are a favorite topic around here. Everybody be nice.
1 posted on 02/09/2005 7:35:49 AM PST by PatrickHenry
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To: VadeRetro; Junior; longshadow; RadioAstronomer; Doctor Stochastic; js1138; Shryke; RightWhale; ...
EvolutionPing
A pro-evolution science list with over 230 names. See list's description at my homepage. FReepmail to be added/dropped.

2 posted on 02/09/2005 7:37:06 AM PST by PatrickHenry (<-- Click on my name. The List-O-Links for evolution threads is at my freeper homepage.)
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To: PatrickHenry
“We like to use a Christmas tree analogy,” said Carroll. “These systems already have all the structural details in place, like the structure of a Christmas tree. And all evolution has to do is to alter these regulatory elements mutationally to bring out a pattern — like hanging ornaments on the tree.”

I'm confused. Is this micro- or macro-evolution? Given this analogy, it seems the former is the case.
3 posted on 02/09/2005 7:42:09 AM PST by mike182d
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To: PatrickHenry

These scientists are stretching what little support they have into a theory that doesn't hold water. They're trying too hard, and need to explore other options.


4 posted on 02/09/2005 7:43:09 AM PST by natewill (Start the revolution NOW!)
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To: PatrickHenry
Cryptic placemarker


5 posted on 02/09/2005 7:45:27 AM PST by js1138
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To: PatrickHenry
“These systems already have all the structural details in place."

Good Design.

6 posted on 02/09/2005 7:49:40 AM PST by DannyTN
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To: PatrickHenry

God invented evolution.


7 posted on 02/09/2005 8:17:56 AM PST by MonroeDNA (US OUT of the UN!)
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To: DannyTN

> Good Design.


Actaully, inefficient evolution. Left in place all sorts of stuff not strictly needed. However, when things change, having that collection of garbage rattling aroudn int he DNA allows for useful changes.


8 posted on 02/09/2005 8:22:03 AM PST by orionblamblam
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To: MonroeDNA
God invented evolution.

The most strident group asserting the falsity of that statement is the biblical creationists. Most atheists and agnostics are perfectly relaxed that believers should attribute evolution to God.

9 posted on 02/09/2005 8:24:07 AM PST by Thatcherite (Conservative and Biblical Literalist are not synonymous)
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To: Thatcherite
Creatios never have answered how you fit millions of animals into a small wooden boat, or how a man could name them all in just a few hours.

They just can't live with the fact that all life came from old pond mud somewhere. Too scary and they can't use their myths to make up rules for everyone anymore. Weak minds, moral prudes in denial.

10 posted on 02/09/2005 8:36:36 AM PST by Step_Into_the_Void (Fiscal conservative - don't take my money - you didn't work for it - I did.)
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To: mike182d

This whole micro/macro thing is getting dangerous. Evolution is evolution. There is only one process. The micro/macro distinction doesn't have to do with the process, but rather with the results. People are getting it right for the most part at the moment, but I'm starting to get a flavor every once in a while that some people consider these different processes. I know it's easier to say "macro-evolution" instead of saying "evolutionary changes that result in the creation of a new species", but we should stay vigilant that everyone understands what people mean when they use these terms.


11 posted on 02/09/2005 8:43:43 AM PST by munchtipq
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To: PatrickHenry

Thanks for the ping!


12 posted on 02/09/2005 8:44:40 AM PST by Alamo-Girl
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To: mike182d
"Is this micro- or macro-evolution? Given this analogy, it seems the former is the case."

There is no difference. "Macro/micro" used as a modifier to evolution is strictly creationist vocabulary. There is only evolution.

13 posted on 02/09/2005 8:53:03 AM PST by Wonder Warthog (The Hog of Steel)
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To: PatrickHenry

I think there is a fly in the ointment.


14 posted on 02/09/2005 8:57:14 AM PST by hgro
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To: natewill
These scientists are stretching what little support they have into a theory that doesn't hold water. They're trying too hard, and need to explore other options.

You may want to read this post and the links provided as well:

http://www.freerepublic.com/focus/f-news/1338459/posts?page=37#37

15 posted on 02/09/2005 9:00:49 AM PST by RadioAstronomer
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To: Step_Into_the_Void
Creatios never have answered how you fit millions of animals into a small wooden boat, or how a man could name them all in just a few hours.

You don't understand. The ark was huge (1.5 times the length of a football field, 75 feet wide and 45 feet tall).

Creationists have explained that the Bible speaks of various "kinds" of creatures (perhaps 8,000 "kinds") that diversified and devolved into the variety of "species" now present. Creationists do believe that genetics mutate over generations, but do not believe that genetic information "increases in complexity or usefulness" over generations (as evolutionists contend).

It would not be all that difficult to include the less than 8,000 "kinds" of air-breathing animals (perhaps babies or young animals) in a ship the size of the ark.

16 posted on 02/09/2005 9:06:36 AM PST by Theo
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To: Theo
Creatios never have answered how you fit millions of animals into a small wooden boat, or how a man could name them all in just a few hours.

A Creationist need not answer this rediculous question as it is not relevant to the Intelligent Design argument.

Straw men never hold up well in arguments.
17 posted on 02/09/2005 9:23:10 AM PST by mike182d
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To: Theo
Here's a question that always nags me about the ark.

How did Noah get species from other climates? Penguins, for instance?

The "babies" hypothesis makes it seem more probable (otherwise, adult elephants, hippos, bovines, seems like it'd get awfully crowded). Thanks for posting that, I don't know if it ever occurred to me.

18 posted on 02/09/2005 9:25:25 AM PST by mbennett203 ("Bulrog, a tough brute warrior who has dedicated his life to ridding the world of hippies.")
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To: Thatcherite
Most atheists and agnostics are perfectly relaxed that believers should attribute evolution to God.

That would be macrocreation. The big picture thing.

Those of a more limited vision beliwve in microCreation (and occasionally and reluctantly concede microevolution)

19 posted on 02/09/2005 9:26:10 AM PST by Oztrich Boy (Intelligent Design is a theory, like "whatever will be, will be" is a prophecy)
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To: mbennett203

I appreciate the civility of this discussion (so far). It's good to chat about different perspectives/theories/explanations without being attacked.

Scripture suggests that the environment pre-flood was very different from the current environment, largely because of a water canopy encircling the earth high in the atmosphere ("firmament" in Scripture). This canopy may have kept temperatures fairly consistent from location to location, and blocked harmful solar rays (hence people living so long pre-flood).

Pre-flood, the environment at the north pole may not have been much different from that in the Middle East. The ancestors of penguins, then, may have lived anywhere. I'd be interested in seeing fossil evidence of where penguin ancestors lived....

It's interesting to do a google search on "noah ark size" to get a better sense of how large the ark was and how many animals could have fit comfortably on it, as well as to read discussions of how Noah's family could have fed and cared for so many, and so on....


20 posted on 02/09/2005 9:38:14 AM PST by Theo
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