Same thing with Dungeon Siege II. If I leave it running, it minimizes every time I do something involving opening a new pane (looking at the map, opening the inventory. . .) If I pause it, it minimizes after running movies. Exiting solved the problem.
I bet the CLI version would be no problem, but I like being able to watch my protein fold.
I have a Radeon 9600SE. What's your video card?
Unknown. It's a Dell Inspiron 6000 laptop. I'd have to look at the specs.
It's not a huge problem, now that I'm aware of it. Plus I don't have a chance to play many games anyway.