I believe he does.
His sympathies lie with the Muslims - His formative years were in Jakarta, enrolled in school with his religion stated as "Islam" - he attended Mosque and studied the Koran -
Even when campaigning, he said the Muslim call to evening prayer was the most beautiful sound on earth and repeated the prayer, word for word and in perfect accent.
Our early years have great impact on our lives.
I believe his sympathies are with the other side.
Updated Correct Link to #64.
“U.N. Lawyers Target U.S. Troops”
http://www.investors.com/NewsAndAnalysis/Article.aspx?id=505775