I think the Dred Scott Decision is used because it retrospect it is so blatantly immoral. However, purely in terms of horrible decisions, I think it makes far more sense to compare Roe to Plessy v. Ferguson (which is also the only SCOTUS decision which a future SCOTUS subsequently overturned, Dred Scott was made moot by post-Civil War amendments).
In fact, Dred Scott is still the law of the land in some respects -- though (obviously) not with regard to slavery. The basic underlying premise of that case -- that only a "person" has legal standing in a U.S. court of law -- still holds true to this day.