Maybe its time to resurrect the "smart spears" idea: a kinetic energy weapon, the smart spear is a 16 foot long titanium tipped, satellite guided carbon steel spear dropped from high altitude that would strike the reactor at mach 2 plus, completely penetrate, and bury itself deep beneath the reactor.
To remain covert, I'd suggest a well placed charge to create a meltdown. Then push for IAEA (and the CIA of course) to go in and do their tests.