Don't forget JAG, which has also dared to show Muslim terrorists.
Also Pax's show Sue Thomas show has shown Muslim's as terrorist.
A few years before 9/11 the terrorist in The Siege were Islamic, even had the Muslims being put in internment camps because of fear in NYC. Haven't seen the movie in years, but I think it was the US's and CIA's fault that the terrorist went on the rampage...your typical Hollywood take on the subject.
One thing wrong in the article. The terrorists in "The Sum of All Fears" were always neo-nazis, even in the book. Just changed the governments and ****ed with the timeline in Jack Ryan's life (in the movie he wasn't Dr. Ryan yet and wasn't married yet, but he was in the book, and the Soviet Union still existed in the book, yet it was the Russian Federation in the movie--although the USSR still existed after he became dr. ryan in "The Hunt for Red October.")
Same producer.