I don't think this is in the same league. Prior to "canonization" of New Testament scriptures by either Protestants or Catholics, some of the books studied were thought to be good but not at the same level of inspiration as the apostolic works.
Protestants merely canonized the works that were clearly apostolic in origin. That the Catholics later canonized the apocrapha, including some books that were not apostolic or whose origins were in doubt, should not be construed as Protestants picking and choosing to suit themselves.
Protestants, Muslims, Jews, Catholic and Orthodox Christian worship the same God.