Seeing as how she's subject to the USMJ, I suppose she'll soon find herself under military investigation.
Depends:
1. Female
2. Minority
3. Officer
4. Doctor
They already look the other way on a lot of things based on demographics and keeping up appearances. My guess is that if there is a link between her and this cult, they will make some decisions based on the facts:
1. If it is tangential, they will cover it up and perhaps keep her in service.
2. If it egregious, and the details will out, they will have to decide what to do based on who else is in the ‘splash’ zone.