If it is Microsoft Word, there are things you can be doing now (that I didn't do) that will make a difference when it comes time to out put to PDF for the Acrobat reader (or for press) and to the Microsoft reader.
It has cost me almost two weeks once the 450+ pages were done going back and reformatting and finding all of the instances so that these formats would turnout properly.
I'll FRemail you with some suggestions if you are using MSWord.
Good luck ... I believe what you had written to date that I had read could still be applicable ... particularly with what I consider to be the headlong rush into anti-terror bills that are much, much more than what is needed. The President, the DOJ, the AG and all of the LEA's already have everything they need to address the current issues.
Instead of using them to forcefully go after the terrorists and the infiltrators, they are passing legislation empowering them to keep a MUCH more careful watch and control on all of us IMHO.
Anyhow, let me know if I can help in any way.
Regards.