As long as the Homeland Defense people and the security agencies leave ordinary, law-abiding citizens alone, and don't start pretending that people praying on the sidewalks in front of abortion clinics are "terrorists," there won't be any trouble.
If they do start behaving tyrannically, then obviously all bets are off. And deservedly so. Americans won't put up with it. No more Wacos. No more Lon Horiuchis. No more Janet Renos.
It sounds like Stratfor/SPLC are hinting how the new agency should proceed. Ignore the terrorists that have oozed into the country all these years. It's the overweight white guys with their too-obedient wives, and kids, at the weekend target-shoot/cookout that are America's true enemy.
Mesage from Stratfor to Homeland Defense: be sure to ignore all them weird folks at Elohim City, just like all the other feds did, too.