I read an outstanding defense of methodological naturalism (as opposed to metaphysical naturalism) the other day. You can read it here.
Quote:
It is not inconsistent to claim there is more going on in the evolutionary process than is dreamt of in evolutionary biology. This is the thesis that there are "hidden variables" causal influences on evolutionary outcomes that are not recognized in our science. If evolutionary theory were causally complete, there would be no room for this idea. However, we have no assurance that the theory covers all the facts that are causally relevant to what happens in evolution. Please note that I am not saying that there now is evidence that such hidden variables exist; my claim is only that they are not ruled out by current theory.But it is clear that Richard Dawkins the great promoter and popularizer of Darwin's theory does rule them out in principle. For he declares that Darwin's theory allows him to be "an intellectually fulfilled atheist."
This is what drives theists (like me) nutz.
But as the author of the linked article Elliott Sober, of the Philosophy Department at the University of Wisconsin points out, when it comes to the idea of possible divine intervention in the world of space and time after the evolutionary process is underway, we have to ask
...what does "divine intervention" mean? In theology, it is often understood to mean God's violating the laws of nature. I do not use the term in this way. [Neither do I.] What I want to consider ... is the view that God supplements what happens in the evolutionary process without violating any laws. [God cannot contradict Himself.] An intervention, as I'll understand the term, is a cause; it can trigger an event or sustain a process. Physicians do both when they intervene in the lives of their patients. Physician intervention does not entail any breakage in the laws of nature; neither does God's.Actually, I understand that this was Newton's understanding.
Sober's analysis
...say[s] nothing about whether there have ever been mutations in the whole history of life that God made sure would happen. Scientists do not have a way of testing this theistic assertion. However, that does not show that it is false. Scientists sometimes use the derisive comment "not even false" to characterize hypotheses that cannot be tested. The derision can be separated from a point on which theists and atheists should agree: there is a difference between hypotheses that the evidence tells us are false and hypotheses that our data do not permit us to test....To the extent that Darwin's theory is often depicted in the light of metaphysical naturalism as Dawkins does and not methodological naturalism (which "keeps its mind open," as explained above), it has more of the flavor of a religious creed than of a scientific theory.
Is every statement in a scientific theory testable? Mathematized theories in biology and in other sciences entail that numbers exist. Is the existence of numbers empirically testable? ...
Carnap (1950) and Reichenbach (1938), among other positivists, held that scientific theories often contain conventional elements. These are statements that are in a theory because they are useful, not because we can offer evidence that they are true.
Or I should say, an antireligious screed.
To the extent that such an understanding of evolution theory prevails, we can understand the promoters of Darwin's theory to be more defending a dogma than engaging in "open" scientific inquiry.
This observation can shed some light on why Darwin's theory has remained fundamentally unchanged for 150+ years: It is a fact of human nature that people will tenaciously defend a religious doctrine "come hell or high water."
But that's not science! Science must remain "open." It cannot just assume causal closure about any aspect of the natural world.
If it does, it eventually puts itself out of business.
FWIW.
"How long were were geocentric theory and Newtownian mechanics considered accepted theory before they were supplanted?"
The answer can be expressed as as simple timespans.
Or I should say, an antireligious screed.