I’ll have to read it again to see the direct quotes attributed to him.
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"I like Karl (Eikenberry), I've known him for years, but they'd never said anything like that to us before," says McChrystal, who adds that he felt "betrayed" by the leak. "Here's one that covers his flank for the history books. Now if we fail, they can say, 'I told you so.' "
Both of these quotes, directly attributed to McChrystal, are problematic. Combined with all of the "Senior Aide" quotes, they show a disdain for the administration, not just in policy, but for particular people in the chain of command.
It's ironic, because it seems the reporter was trying to create a "liberal warrior" out of McChrystal and ended up trashing the administrations strategy in Afghanistan.