Did they say anything about the person(s) who gave the Times the secret information?
Not really, no. This was directed more at the Times than the leakers themselves, though I imagine not one person there would have argued against going after the leakers as well.
Prosecute them both, I say. The leaker for revealing classified info and the Times for printing it. As Freedom of Speech is not absolute (think: fire in a movie theater) neither should be Freedom of the Press, and for the same reason.