Why do you assume atheism is the only viewpoint compatible with the study of the natural world? Many scientists with a strong belief in God simply acknowledge that their belief is outside the scope of their career choice. In any case, how does one use the scientific method to test for the presence of a supernatural agent? I am by no means trivializing religious belief or the importance of spirituality, I am only wondering how science could be used to give them validation.
My post 111 explores the difference between methodological naturalism, metaphysical naturalism and political activism of atheists. The three often are wrongfully conflated in these debates - and by certain "movers and shakers" in the academia, e.g. Lewontin, Singer and Dawkins.
Post 920 was meant to be humorous - forcing the imaginary students to acknowledge ideological prejudice and sort themselves out:
But that is not the objective of the intelligent design movement. The objective of the movement is to remove the presupposition of naturalism in scientific investigations. Go where the evidence leads without unwarranted axioms and postulates like physicists and mathematicians do.
More importantly, the intelligent design hypothesis needs to be understood separately from the intelligent design movement. (more in my post 998) Conflating them results in the same error as conflating methodological naturalism and metaphysical naturalism.