There is some interesting stuff on your anti-evolution wevsite, such as the claim that there is as much information in the genome of a bacterium as ther is in a human. While this is not exactly true, it would contradict the claim that evolution would have to increase the quantity of information to change from a bacterium to a human.
DNA has lots of junk in it. Your skin cells contain the recipe for your toenails in them. If bacteria has a large percentage of junk in their DNA, so what?