Another possibility:
“...SA-8 GECKO was used to down a cargo plane around Damascus by Syrian rebels last year which is highly mobile and has the range of 40,000 feet, well within distance of the reported height (36,000 ft).
http://therightscoop.com/heres-how-isis-could-have-shot-down-that-russian-airliner/
Something like this could have come from the US side, via the CIA Benghazi weapons bazaar... who knows what they were up to. And the Americans let a lot of Russian stuff go from Ghaddafi’s armory to the Islamists too... that’s on our, France, and UK’s hands.
There would have been ELINT from the associated radar
This would likely be detected easily in Egyptian territory with extensive Egyptian Israeli and UN/MFO monitoring
Not exactly "Man-portable air-defense systems (MANPADS or MPADS) are shoulder-launched surface-to-air missiles (SAMs)."