No, it didn't and you seem to be the only person crazy enough to say it did. Had a slave fled from Kentucky into Ohio, or from Delaware to Pennsylvania then federal authorities would have been duty bound to return them. But there is no federal crime against a free black person going from Mississippi to Minnesota or any other state. Now is there?
It cannot be just waved away without deliberately violating the intent expressed in this constitutional clause.
But I am well familiar with the phenomena of people who see nothing wrong with ignoring aspects of constitutional law they don't like. The proper way to deal with it is to change it through the amendment process, not to pretend it doesn't exist.