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New Cellular Evolution Theory Rejects Darwinian Assumptions (Actual Title)
University of Illinois News Release ^ | 6/17/02 | Jim Barlow

Posted on 06/17/2002 4:40:34 PM PDT by Nebullis

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To: VadeRetro
[donh] and Nebullis had a discussion maybe a year and a half ago in which some ideas similar to Woese's got bandied about.

I believe the gist of that discussion was that the early world was an RNA replicating type world from which cellular organization later developed. Maybe you anticipated Woese's direction in thought? I had a conversation before that with Godel regarding the "shape" of the universal tree. On a later thread (you see, I never save any of this stuff--this is my time off), a thread about parity violation, if I remember correctly, I mentioned my views about life originating multiple times.

41 posted on 06/18/2002 5:16:18 PM PDT by Nebullis
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To: Nebullis
bump for later
42 posted on 06/18/2002 5:20:05 PM PDT by RightWhale
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To: donh
Nothing related to the beginnings of cellular life as we know it. Darwin was quite explicit about this. Darwinian evolution applies to the fossil record. What might has set it all off was beyond Darwinian ken, and he was quite careful to say so quite often, to avoid being embroiled in the abiogenesis debates.

I said Darwinians not Darwin. What is being pushed now, I believe, is called Neo-Darwinism. Be that as it may, I still say -- what is needed for Darwinian evolution? The answer is, of course, replication with error in order to generate the information needed for an organism to evolve. If the information is generated prior to and without the assistance of replication, what is the necessity of the replication errors for evolution? And this is not abiogenesis specific as it is stated in the article --- and he suggests that cellular evolution progressed in that order, with translation leading the way. . Cellular evolution, I take it, means exactly that.

43 posted on 06/19/2002 1:13:35 AM PDT by AndrewC
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To: Nebullis
by sharing their evolutionary inventions.

Their INTENTIONS?

RIGHT. . . sure is difficult to get away from the notion of a conscious design isn't it.
44 posted on 06/19/2002 2:10:13 AM PDT by Quix
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To: usconservative
These guys have big imaginations.

What reasonable person could believe that something so complex could happen by random occurrence?

A cell just popped up one day with the DNA structure built in giving it the ability to reproduce and survive on a world void of any organic matter.

45 posted on 06/19/2002 9:28:08 AM PDT by ibme
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To: ibme
A cell just popped up one day with the DNA structure built in giving it the ability to reproduce and survive on a world void of any organic matter.

Nice straw man, but no evolutionary scientist theorizes anything like that.

46 posted on 06/19/2002 9:43:55 AM PDT by Lurking Libertarian
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To: Quix
by sharing their evolutionary inventions.

Their INTENTIONS?

RIGHT. . . sure is difficult to get away from the notion of a conscious design isn't it.

Well, well. A living example of copying with error.

47 posted on 06/19/2002 12:14:48 PM PDT by donh
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To: AndrewC
The answer is, of course, replication with error in order to generate the information needed for an organism to evolve.

Please submit your proof that "replication with error in order to generate the information needed for the organism to evolve." Is some sort of essential stumbling block to the natural origins of life. What Woese and Kauffman & etc. have been trying to point out is that the game before DNA arrived must have been radically different from the game after DNA, to which your prescription applies.

What appears to be the rock bottom necessity is some sort of self-sustaining, energy conserving chemical cycle. Replication may have been so crude and diffuse compared to what we know of now, that we might not regard it as replication at all. All else is bells and whistles for later, as the earth cools down.

48 posted on 06/19/2002 12:23:15 PM PDT by donh
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To: Nebullis
Maybe you anticipated Woese's direction in thought?

Not me. I saw Woese's outside-the-box stuff on that thread and was awed.

49 posted on 06/19/2002 12:28:11 PM PDT by VadeRetro
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To: donh
IT's surprising the error was not greater given all the givens in my current chaos of tasks.
50 posted on 06/19/2002 2:19:10 PM PDT by Quix
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To: donh
Please submit your proof that "replication with error in order to generate the information needed for the organism to evolve."

Have you been napping in the Darwinian classes? You need variation to evolve. That is potential information formed by random mutations of the living organism. And the randomization has to be reproduced to present itself to the natural selector which imparts "realness" to the potential information. Or so say the Darwinians.

51 posted on 06/19/2002 2:53:59 PM PDT by AndrewC
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To: general_re
=)

Akin to leaving a hamburger in the back of the fridge for several months,
waiting for it to evolve into a t-bone steak...

52 posted on 06/19/2002 7:46:34 PM PDT by Tourist Guy
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To: VadeRetro
I would have guessed that truly separately-evolved (no common descent) organisms couldn't really do lateral transfer with any hope of compatibility. I gather that the soup takes the place of the usual common ancestor in this case. Same soup, three lines of "offspring," lateral transfer works.

Same RNA world, different lines of descent to the point where Darwinian evolution becomes a viable way of resolving ancestry.

Woese presents what he calls "A theory for the evolution of cellular organization." The root of the universal tree does not begin at the origin of life, it "has no root in the classical sense", but rather at the Darwinian Threshold, the point at which a level of cellular organization emerges when horizontal gene transfer is no longer the predominant form of novelty generation. It is at this point that vertically generated novelty assumes greater importance and one can speak of Darwinian evolution.

The time-line between the RNA world and modern cellular organization is a long one and includes the evolution of translation. Crossing the threshold happened at different times for the separately evolved organisms. There is ample evidence for this from molecular data. Bacteria crossed this threshold first. "The bacterial versions of the central (universal) cellular systems respresent earlier ancestral versions of these systems than do their archael or eukaryotic counterparts." Darwinian evolution predicts that genes should be shared more as you move to the bottom of the universal tree until one can predict a common ancestor which contains all the genes. Instead, there are gene families not common to the various prokaryotic and eukaryotic cells.

Woese doesn't address the point, unfortunately [compatible lineages]. Nor does he explain here what his theory does better, or even differently. What are the consequences, the tests?

The consequenses are an explanation for the molecular problems at the root of the tree. This explanation goes a long way toward explaining cellular evolution and the origin of the known different lineages at the root of the universal tree.

53 posted on 06/20/2002 8:42:09 AM PDT by Nebullis
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To: AndrewC
Oops! Darwinians will even like that less. Replication is supposed to have the honored position. That also implies something on the order of RNA world.

Replication does have the honored position. Woese is talking about translation in the evolution of cellular organization.

54 posted on 06/20/2002 8:44:36 AM PDT by Nebullis
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To: Nebullis
Thanks for the details. (Twenty creationists will now jump in and ask "You call those vague conjectures details?")

I still like endosymbiosis for the origin of eukaryotes. There's the resemblance between mitochondria and bacteria and the very late appearance in the fossil record. (Cellulars, when they appeared, probably gobbled the RNA world right up.) Even so, that still leaves Woese's ideas looking good for the origins of archaea and bacteria.

55 posted on 06/20/2002 9:12:40 AM PDT by VadeRetro
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To: VadeRetro
I think it's quite well established that chloroplasts and mitochondria were endosymbionts at one time. Woese has no argument with this. Other biologists have proposed endosymbiosis for the evolution of the whole eukaryotic cell, including the nucleus. This theory offers a different explanation. The root of the tree does not support a universal common ancestral cell. The endosymbiosis theories for cellular evolution are an attempt to get around that problem. Woese's theory is a more effective explanation and has more empirical support.
56 posted on 06/20/2002 9:27:01 AM PDT by Nebullis
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To: Nebullis
I think it's quite well established that chloroplasts and mitochondria were endosymbionts at one time. Woese has no argument with this.

Another point cleared up! Thanks.

57 posted on 06/20/2002 10:02:38 AM PDT by VadeRetro
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To: VadeRetro; Nebullis
I don't suppose either of you would care to admit that the hypothesis of different origins of the several types of cells, yet with the cells still having interchangable parts, is support for ID. Its not a slam dunk, but it shows the facts are consistent with what would be expeceted if a common designer (interchangable parts) made several types of cells.

Is the natualist hypothesis more likely than the ID hypothesis? No, if cells did not have a single common biologic ancestor ID is more likely. Two of the three cell types show up as soon as Earth cools down enough to allow them (after asteriod shower about 3.6 bya). The other may have been there, but not quite in its current form.

The crux of my point is this : If the mythical pre-biotic 'soup' naturalistically produced not one but three separate cells in a geologically insignificant amount of time, then why have origin of life experiments hit one brick way after another since Urey-Miller?

I am not asking you to 'see the light'. I am just asking you to acknowledge that the lack of common biologic origin despite interchangability of some parts and quick arrival time all make ID a little bit more likely. Are either of you willing to concede even that much?

58 posted on 06/20/2002 11:59:42 AM PDT by Ahban
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To: Ahban
I don't suppose either of you would care to admit that the hypothesis of different origins of the several types of cells, yet with the cells still having interchangable parts, is support for ID.

I don't suppose you've come to the realization yet that whatever science turns up with empirical support would be slam-dunk evidence for ID.

59 posted on 06/20/2002 12:27:54 PM PDT by Nebullis
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To: AndrewC
Have you been napping in the Darwinian classes? You need variation to evolve. That is potential information formed by random mutations of the living organism. And the randomization has to be reproduced to present itself to the natural selector which imparts "realness" to the potential information. Or so say the Darwinians.

Uh huh. The original Darwinian formula applies to DNA-bearing entities that leave fossils behind in a comparatively cool earth. Please submit your proof that nearly-exact copying of completely discrete entities is the only possible way evolution could have happened.

As I have been manfully trying to suggest thru several threads here, the story has to be radically different when the evolving entities are not altogether discrete, and temperatures are so high that finding means of conserving energy is a trivial task.

As the Woese article I pointed to back in that old thread suggests, the essential problems of loosely organized evolving entities in a planet sized hot soup of bubbly broth are not anything like the problems of entities familiar to Darwin, and us. For RNA world and before, the field of contention in which evolutionary selection can occur, is something like staying a federated entity, not gathering and utilizing resources--a requirement of a far cooler world.

A different basic problem calls for a different basic survival paradigm. And I'd really recommend the Woese article to you on this subject, as it is very clear about how massive distinctions in mean earth temperature have to require massive distinctions in basic survival problems.

60 posted on 06/20/2002 2:02:46 PM PDT by donh
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